Crowdsourcing the Serengeti: citizen scientists classify millions of photos online


Sometimes the best way to deal with mountains of data is to turn to the public for help. That’s what Snapshot Serengeti did to classify millions of photos from savannah camera traps in Tanzania.

Snapshot Serengeti 01Selfies gone wild. A female lion looks directly into the Serengeti camera lens. (Photo: Snapshot Serengeti, CC BY-NC-ND)

Alexandra Swanson, University of Oxford

At this very moment in Serengeti National Park, Tanzania, more than 200 hidden cameras are snapping photos day and night, capturing the secret lives of the Serengeti’s most elusive animals.

And, at this very moment, one of those cameras is probably getting chomped by a hyena.

Such are the perils of being a camera trap in our Snapshot Serengeti survey.

Snapshot Serengeti 02With a night-time flash, a hyena is snapped by the camera trap.

Snapshot Serengeti 03A minute or two later, the hyena takes a bite. (Photos: Snapshot Serengeti, CC BY-NC-ND)

The Serengeti is an incredibly diverse and dynamic ecosystem, famous for its high density of large carnivores and the annual migration of 1.6-million wildebeest and zebra.

When we found ourselves with more pictures than there are migrating antelope, we knew we had to find a way to classify and use all the information we were collecting. So we asked citizen scientists to work through these millions of images and help extract the valuable information they contain. Within three days of asking for the global online community’s help, we had successfully processed an 18-month backlog of more than 1-million classifications.

The efforts of about 30 000 volunteers who identified the images via the website Snapshot Serengeti helped classify and catalogue the first three years of data, which are now published in Nature’s new journal, Scientific Data. This is the largest data set of its kind. It would never have been possible without the help of the general public.

A surfeit of snapshots

As a graduate student in Ecology, Evolution, and Behavior at the University of Minnesota, I set 225 cameras to study how large carnivores shared the landscape with each other and their prey. Over the last five years, these remote, automatic cameras have captured more than two million images and more than 40 different animal species, providing an unprecedented look into the savannah wildlife ecology.

Snapshot Serengeti 05Setting up a camera trap in the field. (Photo: Alexandra Swanson, CC BY-NC-ND)

Camera traps have revolutionised ecology and conservation research by providing a relatively low-cost method to monitor many different species across large areas. Triggered by a combination of heat and motion, when an animal walks by, the cameras snap a picture. Every photograph has a location, date, and time. By combining the information in the images, researchers can paint a picture of how many animals there are, where they are, and what they’re doing. With enough cameras taking pictures, researchers can answer questions about how different species interact to drive the complex dynamics of a natural ecosystem.

But enough data to answer complex ecological questions often means too much data for researchers to process. And, despite recent advances in computer vision research, the human eye – and brain – is still the best at this kind complex pattern recognition.

Snapshot Serengeti 04

Citizen scientists save the day

This is precisely the problem that I was facing: despite relentless vandalism by curious hyenas and elephants, the camera traps were capturing more pictures than I could possibly process alone, or even with a small army of undergraduate volunteers. So fellow ecologist Margaret Kosmala and I partnered with the world’s largest and most successful citizen science platform, The Zooniverse, to build Snapshot Serengeti.

Like all Zooniverse projects, Snapshot Serengeti was designed to let anyone – not just experts – make valuable and reliable contributions. We asked users to identify and count the species that they saw in each photo. Volunteers could filter animals by body shape, color, pattern, even tail shape to narrow in on the best possible answer. On the discussion forums, they could talk with each other and with us about what they were seeing and why it mattered. This could all be done in their pyjamas on the couch, since all they needed was an internet connection.

Snapshot Serengeti 08

As it turns out, there are a lot of people interested in contributing to science. It took only three days for volunteers on the website to work through our year-and-a-half backlog of data. Since we launched it in 2012, volunteers continue to classify Snapshot Serengeti photos faster than we can bring them back from the field.

More importantly, though, volunteers on Snapshot Serengeti produce incredibly reliable classifications. By sending each image to multiple volunteers, we were able to aggregate across their answers to produce a final “consensus answer.” We used a plurality algorithm – which is pretty much just a slightly fancy majority vote. When we compared the consensus citizen scientist answers to a set of more than 4 000 expert-classified images, volunteers were right 97% of the time. On top of that, we can look at the disagreement in the raw answers to predict whether any given image is easy or hard, and thus whether the answer is likely to be right or wrong. That lets us target expert effort on just those 3% of images that really need it.

Snapshot Serengeti 06

Findings from the photos

The data produced by Snapshot Serengeti have already led to new insights about the Serengeti ecosystem. For example, these cameras revealed how lions and cheetahs divide up the same high-value real estate hot spots on a moment-to-moment basis – providing a possible explanation for their curious coexistence. By integrating camera trap data with satellite imagery, we are starting to explore the hidden drivers of the wildebeest migration, and to study how prey animals balance the need for food with the relentless risk of being eaten.

Snapshot Serengeti has enormous potential for widespread use beyond the ecological questions that drove its design. We hope that the published data set, freely and publicly available on the Dryad Digital Repository, will be used by researchers across disciplines – whether they are studying rare species or training computers to automatically detect and identify species.

Snapshot Serengeti’s success demonstrates the enormous potential for citizen science to help researchers tackle bigger questions than ever before. Camera traps provide a way to collect the ecological data necessary to answer bigger questions about the world around us, but citizen science is what provides a way to turn this data into new scientific knowledge, enabling research at a scope and scale otherwise impossible.

Alexandra Swanson is Postdoctoral Fellow – Ecology and Citizen Science at University of Oxford.

This article was originally published on The Conversation. Read the original article.

The Conversation